Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1009
Parameters: 2 7 7 80 10 50 1000
Length:  54056

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18028--18072
10
4.5
10
81
8
56
77
8
2
11
1.07
18030--18068
11
3.6
11
82
6
53
82
5
2
10
0.93
21380--21497
50
2.3
51
84
8
143
33
16
13
37
1.87
24167--24213
23
2.1
23
84
7
62
51
12
4
31
1.59
29548--29641
46
2.0
46
91
4
154
36
21
18
24
1.95
31400--31446
20
2.3
20
85
0
67
29
36
12
21
1.91
35096--35135
18
2.2
18
86
4
53
12
27
0
60
1.33
36187--36222
15
2.5
14
95
4
63
16
11
2
69
1.29
36263--36300
10
3.7
10
96
3
67
15
0
7
76
1.01
36262--36316
11
4.9
11
86
10
76
14
1
12
70
1.24
36261--36316
12
4.9
12
82
8
64
14
1
12
71
1.23
38082--38119
19
2.0
19
100
0
76
42
5
31
21
1.75
38220--38273
15
3.5
15
89
5
81
20
11
5
62
1.47
38220--38276
16
3.6
16
92
7
98
21
12
5
61
1.50
38220--38274
17
3.4
17
90
10
96
20
10
5
63
1.46
38314--38375
13
4.8
13
86
7
81
17
4
3
74
1.13
38317--38375
12
4.7
12
85
10
73
15
5
3
76
1.10
38316--38363
14
3.6
14
86
8
64
12
6
2
79
1.01
39360--39406
23
2.1
23
88
7
71
51
14
4
29
1.62
47558--47608
6
8.5
6
86
0
75
76
0
19
3
0.94
47559--47604
24
1.9
24
95
0
83
76
0
19
4
0.96
47978--48021
22
2.0
22
95
0
79
34
4
36
25
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52215--52262
17
2.8
17
80
0
60
8
10
4
77
1.12

Tables:   1

The End!