Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2862
Parameters: 2 7 7 80 10 50 1000
Length:  50381

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3744--3849
55
2.0
54
82
14
130
41
16
14
28
1.86
4876--5047
27
6.5
27
80
7
165
25
15
29
29
1.96
4875--5047
54
3.3
52
83
5
199
26
15
29
29
1.96
12735--12912
27
6.6
27
83
3
196
26
14
29
29
1.95
12735--12912
54
3.3
55
84
4
236
26
14
29
29
1.95
18856--18935
32
2.5
32
79
0
97
21
10
20
48
1.78
24312--24401
46
2.0
46
93
4
155
25
16
22
35
1.95
24992--25019
12
2.3
12
100
0
56
21
7
0
71
1.09
27764--27800
10
3.6
10
88
3
56
78
8
0
13
0.96
27764--27800
11
3.5
11
92
7
60
78
8
0
13
0.96
28665--28756
21
4.4
21
76
13
84
68
1
21
8
1.23
28676--28726
15
3.5
14
81
7
66
78
0
17
3
0.90
28712--28766
25
2.2
26
84
15
71
67
1
20
10
1.30
30414--30451
20
1.9
19
89
5
58
26
28
13
31
1.93
35184--35218
18
1.9
18
88
11
54
5
14
5
74
1.19
49202--49265
20
3.2
20
84
6
76
34
34
3
28
1.73
49565--49620
29
2.0
27
89
6
85
76
1
5
16
1.05
49564--49616
13
3.8
13
81
13
70
81
1
3
13
0.92
49660--49693
1
34.0
1
100
0
68
100
0
0
0
0.00

Tables:   1

The End!