Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1381
Parameters: 2 7 7 80 10 50 1000
Length:  48264

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1368--1549
39
4.6
40
85
4
210
25
28
20
25
1.99
1520--1596
40
1.9
41
81
7
95
28
28
19
23
1.98
9192--9414
40
5.6
40
84
3
236
26
28
20
24
1.99
11290--11322
17
1.9
17
93
0
57
45
0
9
45
1.35
11384--11801
138
3.1
135
91
2
651
45
6
7
40
1.58
29956--30042
25
3.5
25
79
3
86
33
19
19
27
1.96
35868--36094
43
5.4
42
73
11
187
24
15
23
35
1.94
35903--36102
85
2.4
84
88
2
303
25
17
24
34
1.96
39338--39457
25
4.8
25
84
4
127
32
20
22
24
1.98
43452--43672
78
2.8
78
83
11
258
24
27
22
25
2.00
43452--43672
117
1.9
118
81
11
276
24
27
22
25
2.00
43452--43672
39
5.7
39
83
10
226
24
27
22
25
2.00

Tables:   1

The End!