Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1035
Parameters: 2 7 7 80 10 50 1000
Length:  48174

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7605--8070
122
3.8
122
81
9
593
28
15
21
35
1.93
7598--8137
252
2.1
252
93
2
906
29
14
20
35
1.92
8007--8676
73
9.2
72
85
7
822
31
15
18
35
1.92
8011--8680
145
4.6
144
88
6
876
31
15
18
34
1.92
8598--8815
86
2.5
86
88
1
321
27
16
19
36
1.94
8759--8985
58
4.1
56
81
6
257
31
15
17
35
1.91
8759--8985
55
4.1
55
78
7
260
31
15
17
35
1.91
9227--9255
14
2.1
14
100
0
58
72
0
0
27
0.85
9227--9260
14
2.3
15
90
10
52
73
0
0
26
0.83
9259--9359
30
3.4
30
82
4
116
29
22
3
43
1.71
9288--9368
29
2.8
29
79
9
92
33
20
2
43
1.66
9779--9818
14
2.9
15
82
14
50
55
0
42
2
1.13
9895--9977
23
3.6
23
81
16
100
72
0
27
0
0.85
9895--9964
12
6.2
11
84
15
90
72
0
27
0
0.84
9895--9983
12
7.6
12
78
18
82
71
0
26
1
0.92
9915--9978
13
5.3
12
78
10
69
75
0
25
0
0.81
9895--10004
37
3.1
35
81
12
118
72
0
25
1
0.94
9904--10005
24
4.2
24
69
15
68
74
0
23
1
0.92
9905--10004
19
5.4
18
68
21
57
74
0
24
2
0.93
10109--10155
23
2.0
23
88
8
69
76
6
17
0
0.98
10105--10143
13
3.0
13
96
0
69
79
7
12
0
0.93
10293--10327
15
2.3
15
90
9
54
88
0
11
0
0.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10880--10928
16
3.0
16
80
16
64
32
14
12
40
1.83
10927--10964
19
2.0
20
94
5
69
42
13
10
34
1.78
10956--11007
9
6.0
9
78
17
65
86
0
0
13
0.57
10956--11006
10
4.7
10
77
17
57
88
0
0
11
0.52
10959--11005
24
2.0
24
95
0
85
87
0
0
12
0.55
11071--11503
18
25.0
18
69
16
213
30
13
11
45
1.78
11071--11503
17
25.0
17
70
14
201
30
13
11
45
1.78
11071--11277
53
3.9
53
74
8
159
29
14
12
43
1.82
11084--11225
73
1.9
73
81
8
173
30
14
12
42
1.82
11314--11486
90
1.9
88
86
6
242
31
12
11
45
1.77
12171--12232
29
2.1
29
93
0
106
3
32
1
62
1.20
20741--20798
23
2.6
21
78
10
62
36
5
0
58
1.20
22400--22436
8
4.8
8
81
18
51
37
0
0
62
0.96
22397--22440
15
3.0
15
83
12
56
36
0
0
63
0.95
26061--26100
20
2.0
20
90
0
62
27
10
12
50
1.72
26046--26112
34
1.9
35
90
3
109
31
8
13
46
1.74
26040--26116
14
5.0
15
71
20
52
33
9
14
42
1.77
32514--32560
25
2.0
24
83
8
60
46
0
4
48
1.21

Tables:   1

The End!