Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2780
Parameters: 2 7 7 80 10 50 1000
Length:  41227

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5068--5129
10
5.9
10
74
10
52
33
32
3
30
1.74
5068--5130
21
3.0
21
88
2
90
33
33
3
30
1.74
6168--6201
15
2.3
15
89
0
50
35
29
32
2
1.73
9937--9998
10
5.9
10
74
10
52
33
32
3
30
1.74
9937--9999
21
3.0
21
88
2
90
33
33
3
30
1.74
17470--17516
15
3.1
15
81
9
51
68
0
19
12
1.21
17460--17516
28
2.0
29
83
13
73
68
0
19
12
1.20
17546--17621
12
6.3
12
68
17
50
63
1
23
11
1.36
17547--17587
21
1.9
22
90
5
66
70
0
19
9
1.14
19498--19546
10
4.9
10
78
9
55
26
30
16
26
1.97
19498--19544
20
2.3
20
89
7
69
25
31
17
25
1.97
25895--25958
21
2.9
22
86
4
85
28
3
32
35
1.73
37869--37904
13
2.8
13
95
4
65
13
0
5
80
0.88

Tables:   1

The End!