Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3248
Parameters: 2 7 7 80 10 50 1000
Length:  103944

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1744--1790
23
2.1
23
84
7
62
51
12
4
31
1.59
7075--7130
17
3.7
15
88
7
78
19
12
5
62
1.49
7075--7128
15
3.4
16
92
7
92
18
11
5
64
1.44
7171--7214
11
4.0
11
96
0
79
20
0
9
70
1.14
11690--11821
28
4.8
28
85
10
182
35
28
9
25
1.88
11690--11822
57
2.4
55
84
12
182
35
28
9
26
1.88
19081--19121
21
2.0
21
86
9
59
7
14
2
75
1.12
21093--21125
13
2.5
13
95
0
57
21
12
3
63
1.41
21166--21207
11
3.8
11
87
12
68
14
0
7
78
0.95
21168--21206
10
3.7
10
86
6
51
12
0
7
79
0.93
21167--21211
12
3.9
12
88
11
76
15
0
8
75
1.03
21166--21210
22
2.0
22
100
0
90
15
0
8
75
1.03
31525--31557
1
33.0
1
93
0
57
0
96
0
3
0.20
31633--31695
1
63.0
1
77
0
63
0
4
88
6
0.61
31637--31696
21
2.8
21
84
2
75
0
5
86
8
0.69
31629--31694
16
4.2
16
80
3
80
0
6
87
6
0.65
32109--32142
13
2.6
13
85
0
50
20
8
2
67
1.31
40665--40707
15
2.8
16
89
7
70
18
11
2
67
1.32
40747--40779
11
3.0
11
100
0
66
18
0
9
72
1.10
41769--41815
23
2.1
23
84
7
62
51
12
4
31
1.59
43506--43558
23
2.4
22
76
20
56
9
18
1
69
1.25
48659--48819
27
6.0
27
83
2
189
34
8
27
29
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48657--48823
54
3.1
54
84
1
210
35
7
27
28
1.85
53892--53934
21
2.0
22
86
4
61
25
20
6
46
1.76
54040--54086
23
2.1
23
84
7
62
51
12
4
31
1.59
57215--57240
13
2.0
13
100
0
52
46
7
0
46
1.31
57629--57667
20
1.9
21
89
5
62
35
12
28
23
1.91
58921--58974
18
3.2
17
73
21
51
12
25
1
59
1.44
58943--58994
18
2.9
18
80
8
61
15
19
5
59
1.56
58999--59096
6
15.8
6
71
8
63
5
19
3
72
1.17
61210--61235
13
2.0
13
100
0
52
46
7
0
46
1.31
61625--61663
20
1.9
21
89
5
62
38
12
25
23
1.90
64158--64212
15
3.8
15
85
2
69
1
21
1
74
1.01
66294--66333
12
3.6
11
87
9
55
12
5
7
75
1.18
66293--66333
11
3.6
12
87
9
59
12
4
7
75
1.16
73219--73256
15
2.5
15
95
0
67
21
13
2
63
1.42
73294--73327
11
2.9
12
91
8
61
17
0
5
76
0.98
73308--73343
17
2.1
18
94
5
65
13
0
5
80
0.88
73298--73346
11
4.9
11
78
19
54
18
0
8
73
1.07
74335--74381
23
2.1
23
84
7
62
51
12
4
31
1.59
77557--77649
19
5.1
19
72
17
88
46
11
10
31
1.75
77547--77672
54
2.3
54
93
0
225
42
14
10
32
1.79
86189--86217
12
2.3
13
94
5
51
24
0
0
75
0.80
93408--93568
27
6.0
27
83
5
182
34
8
26
29
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100924--100953
15
2.1
14
93
6
51
23
0
0
76
0.78

Tables:   1

The End!