Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2894
Parameters: 2 7 7 80 10 50 1000
Length:  73220

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5582--5647
33
2.0
33
82
8
80
33
16
22
27
1.96
6763--6796
10
3.3
10
95
4
59
73
8
0
17
1.08
6762--6796
11
3.3
11
92
8
63
74
8
0
17
1.06
9945--10010
33
2.0
33
82
8
80
33
16
22
27
1.96
10666--10712
20
2.3
20
85
0
67
29
36
12
21
1.91
14937--14983
20
2.3
20
85
0
67
29
36
12
21
1.91
22880--22922
12
3.6
12
96
0
77
11
0
9
79
0.95
26433--28007
785
2.0
785
100
0
3150
28
18
16
37
1.92
30188--30259
13
5.6
13
75
14
60
75
2
6
15
1.14
30240--30289
16
3.5
15
80
20
54
72
6
16
6
1.25
30240--30311
30
2.6
28
81
12
85
69
5
15
9
1.34
31182--31216
18
1.9
18
88
11
54
57
0
20
22
1.41
33636--33688
23
2.4
22
76
20
56
9
18
1
69
1.25
36055--36087
6
5.3
6
92
7
57
84
0
0
15
0.61
36055--36087
13
2.6
13
95
4
59
84
0
0
15
0.61
36047--36087
19
2.1
20
95
4
75
82
0
0
17
0.66
38064--38121
10
5.7
10
76
11
64
29
27
13
29
1.94
38064--38124
20
3.0
20
83
9
79
27
26
13
32
1.93
41312--41344
16
2.1
16
100
0
66
18
18
12
51
1.76
43737--43776
17
2.4
17
95
4
73
25
10
2
62
1.39
43819--43847
12
2.4
12
100
0
58
13
0
6
79
0.93
50187--50254
13
5.2
13
78
16
77
19
8
1
70
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50218--50252
14
2.6
14
95
4
63
14
5
0
80
0.89
50188--50254
27
2.5
27
81
13
77
19
7
1
71
1.17
55509--55571
21
3.0
21
90
2
90
33
33
4
28
1.78
57291--57346
24
2.4
23
72
3
58
23
3
32
41
1.71
61621--61668
17
2.8
17
80
0
60
8
10
4
77
1.12
63845--63869
13
1.9
13
100
0
50
16
8
0
76
1.02
65881--65938
10
5.7
10
76
11
64
29
27
13
29
1.94
65881--65941
20
3.0
20
83
9
79
27
26
13
32
1.93
67414--67456
22
1.9
22
85
4
59
11
23
0
65
1.25
68944--69000
20
2.8
19
82
10
69
28
26
12
33
1.92
69931--69960
4
7.8
4
92
7
53
80
0
0
20
0.72

Tables:   1

The End!