Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2783
Parameters: 2 7 7 80 10 50 1000
Length:  61022

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4527--4622
49
2.0
49
100
0
192
25
12
16
45
1.82
6835--6876
22
2.0
21
85
4
57
50
7
2
40
1.43
6853--6885
17
1.9
18
88
11
52
42
12
0
45
1.41
11278--11355
40
2.0
40
87
5
113
37
19
21
21
1.95
11402--11555
41
3.8
41
84
5
188
18
20
31
29
1.96
11402--11554
82
1.9
82
86
5
220
18
20
31
30
1.96
11713--11768
27
2.1
27
83
6
71
12
35
7
44
1.70
15263--15463
43
4.7
43
81
2
197
22
17
29
30
1.97
15263--15463
86
2.3
86
83
0
249
22
17
29
30
1.97
15937--16226
145
2.0
145
100
0
580
42
14
7
35
1.74
20891--20958
33
2.1
33
82
0
82
39
23
13
23
1.90
31833--31919
33
2.6
33
81
1
111
35
0
10
54
1.35
31868--31930
7
9.4
7
77
14
53
38
0
6
55
1.25
31874--31930
28
2.1
27
84
9
73
40
0
7
52
1.28
31951--31991
21
2.0
21
85
4
57
43
0
14
41
1.45
31985--32024
14
2.9
14
84
0
53
42
2
10
45
1.51
31985--32024
21
1.9
21
84
0
53
42
2
10
45
1.51
33596--33634
20
1.9
21
85
15
55
48
5
7
38
1.54
37722--37770
23
2.1
24
88
3
73
65
0
34
0
0.93
37725--37791
14
4.7
14
73
15
57
67
0
32
0
0.91
37742--37805
20
3.5
20
72
24
77
67
0
32
0
0.91
37736--37806
34
2.1
34
100
0
142
69
0
30
0
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37762--37819
24
2.6
23
76
12
59
70
0
29
0
0.87
38111--38160
21
2.4
20
87
12
66
74
12
6
8
1.22
38666--38714
25
1.9
25
87
4
71
24
12
2
61
1.42
39448--40207
304
2.5
304
92
4
1291
51
7
10
30
1.63
42246--42484
77
3.1
77
90
2
390
38
11
10
39
1.76
45624--45686
22
2.9
22
85
0
90
25
49
11
14
1.76

Tables:   1

The End!