Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1984
Parameters: 2 7 7 80 10 50 1000
Length:  90121

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3164--3426
40
6.6
40
85
4
291
24
20
27
26
1.99
3217--3461
80
3.1
80
83
3
219
25
20
28
25
1.99
8293--8346
22
2.5
22
96
0
99
40
46
1
11
1.50
8392--8492
27
3.8
27
86
3
134
33
22
24
18
1.97
30411--30595
79
2.3
81
83
7
227
24
22
27
24
2.00
30412--30595
40
4.6
40
82
9
207
25
22
27
24
2.00
30464--30628
79
2.1
79
83
6
201
26
21
27
24
1.99
35622--35682
30
2.0
30
83
0
77
40
4
22
31
1.75
36389--36560
67
2.6
66
82
7
179
33
16
26
22
1.96
36413--36596
67
2.8
64
80
7
201
30
16
28
23
1.97
44445--44582
43
3.3
42
79
6
145
31
16
23
27
1.96
48361--48435
36
2.1
36
100
0
150
25
10
25
38
1.88
49796--50016
80
2.8
80
80
7
202
27
27
20
24
1.99
49836--50016
80
2.3
80
83
9
219
27
27
20
23
1.99
49833--50016
40
4.6
40
81
7
196
28
27
20
23
1.99
56081--56194
43
2.7
42
82
8
135
28
17
24
28
1.97
59677--59806
41
3.3
40
84
8
160
28
27
20
23
1.99
72670--72770
27
3.8
27
86
3
134
18
24
22
33
1.97
72816--72869
22
2.5
22
96
0
99
11
1
46
40
1.50
82617--82660
17
2.4
19
88
11
65
9
31
40
18
1.81
84104--84194
45
2.0
45
84
0
119
35
21
13
29
1.92
88678--88737
30
2.0
29
90
3
93
26
20
20
33
1.97

Tables:   1

The End!