Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2010
Parameters: 2 7 7 80 10 50 1000
Length:  29662

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7790--7820
4
8.0
4
92
7
55
74
0
0
25
0.82
7790--7826
11
3.4
11
92
7
58
75
0
0
24
0.80
9173--9225
23
2.4
22
76
20
56
9
18
1
69
1.25
17141--17193
23
2.4
22
76
20
56
11
16
1
69
1.26
21187--21233
20
2.3
20
88
0
67
25
31
17
25
1.97
22823--22868
13
3.6
13
94
2
76
78
6
0
15
0.95
22820--22870
25
2.1
24
96
3
93
70
7
0
21
1.12
22820--22870
12
4.2
12
95
5
93
70
7
0
21
1.12
22908--22963
16
3.6
16
90
9
98
64
5
12
17
1.45
22912--22963
14
3.6
14
90
10
86
65
5
11
17
1.44

Tables:   1

The End!