Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1494
Parameters: 2 7 7 80 10 50 1000
Length:  44498

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11191--11342
27
5.6
27
86
4
200
42
20
18
18
1.89
11191--11356
81
2.0
81
88
4
246
42
19
18
19
1.90
11199--11359
54
3.0
53
86
3
223
42
19
18
19
1.90
11656--11773
28
4.2
28
86
0
155
22
24
24
27
2.00
18659--18806
33
4.5
33
87
1
208
31
20
18
29
1.97
18646--18806
66
2.4
66
89
0
250
31
21
18
29
1.97
20782--21064
88
3.2
88
84
5
252
41
12
13
32
1.81
20810--21080
87
3.1
88
85
3
332
39
10
14
35
1.81
21104--21268
88
1.9
88
82
2
206
46
9
12
32
1.73
21536--21702
90
1.8
90
84
5
228
38
22
20
19
1.94
24367--24405
11
3.5
11
85
3
51
71
10
0
17
1.12
24728--24785
29
2.0
29
86
3
80
5
13
6
74
1.20
29362--29391
15
2.0
15
100
0
60
46
13
13
26
1.80
29698--29860
33
4.9
33
85
5
206
32
20
18
28
1.96
29700--29860
66
2.4
66
89
2
243
31
21
18
28
1.97
41424--42050
319
2.0
318
86
1
880
34
17
14
33
1.90

Tables:   1

The End!