Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2077
Parameters: 2 7 7 80 10 50 1000
Length:  22258

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1146--1303
68
2.3
67
97
0
280
31
14
30
24
1.95
1180--1377
68
2.9
67
84
8
192
33
15
29
21
1.94
8610--8789
66
2.7
64
88
8
222
33
14
28
23
1.94
8635--8789
66
2.3
66
92
5
260
31
14
30
23
1.94
8736--8863
66
1.9
66
85
7
177
34
16
29
19
1.94
10747--10773
10
2.7
10
100
0
54
18
11
29
40
1.85
11105--11158
20
2.7
20
82
0
63
24
20
18
37
1.94
11105--11178
30
2.5
30
86
8
98
21
20
18
39
1.93
11105--11169
20
3.2
20
71
16
53
23
21
16
38
1.93
12808--12846
11
3.7
10
87
12
60
84
0
12
2
0.72
12808--12852
22
2.1
21
91
4
72
82
0
13
4
0.82
13858--13953
6
15.7
6
69
7
59
70
3
18
7
1.24
13858--13908
18
2.9
18
82
2
68
72
5
15
5
1.24
13914--13951
13
2.8
13
82
17
51
73
0
18
7
1.06
13915--13965
21
2.4
21
74
6
50
74
1
17
5
1.11
13968--14030
33
1.9
33
84
12
85
53
6
26
12
1.62
15806--15859
20
2.7
20
82
0
63
24
20
18
37
1.94
15806--15879
30
2.5
30
86
8
98
21
20
18
39
1.93
15806--15870
20
3.2
20
71
16
53
23
21
16
38
1.93

Tables:   1

The End!