Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1071
Parameters: 2 7 7 80 10 50 1000
Length:  46888

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2433--2610
27
6.6
27
83
3
205
26
15
28
29
1.96
2434--2589
82
1.9
81
88
3
233
26
15
28
29
1.96
2430--2610
82
2.2
81
83
2
229
27
15
27
29
1.96
10490--10665
27
6.5
27
84
2
192
26
14
28
30
1.95
10489--10665
54
3.3
54
84
5
225
26
14
28
29
1.95
10490--10644
81
1.9
81
89
2
240
26
14
29
29
1.95
10486--10665
81
2.2
81
84
2
236
26
15
28
30
1.96
12193--12305
56
2.0
56
100
0
226
25
33
14
26
1.94
17227--17278
27
1.9
27
88
7
79
34
26
21
17
1.95
20522--20579
28
2.1
28
81
12
66
62
3
12
22
1.45
20661--20706
21
2.1
22
88
4
67
67
0
6
26
1.15
23046--23108
31
2.0
31
87
0
90
25
23
15
34
1.95
23319--23395
24
3.2
24
88
3
111
28
19
19
32
1.96
23445--23511
20
3.3
20
87
0
98
31
20
13
34
1.92
23445--23500
11
5.5
11
71
16
57
30
19
14
35
1.91
31090--31151
31
2.0
31
90
0
97
25
24
14
35
1.93
31365--31461
47
2.1
47
96
0
176
28
20
21
28
1.98
31358--31462
24
4.4
24
93
3
176
27
21
20
29
1.98
31512--31578
20
3.3
20
89
0
107
32
20
13
32
1.92
35078--35153
30
2.5
30
95
0
134
36
5
5
52
1.47
37337--37560
40
5.6
40
82
10
246
24
27
22
25
2.00
37337--37561
79
2.8
78
82
7
274
24
27
22
25
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37337--37561
119
1.9
120
83
8
298
24
27
22
25
2.00
45219--45438
40
5.7
40
81
11
253
25
27
22
24
2.00
45219--45438
79
2.8
80
81
13
244
25
27
22
24
2.00

Tables:   1

The End!