Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2811
Parameters: 2 7 7 80 10 50 1000
Length:  87583

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2316--2454
43
3.2
42
83
5
145
27
17
25
28
1.98
9674--9822
42
3.5
43
78
8
142
28
20
25
26
1.99
13900--13975
22
3.3
22
67
22
66
31
14
30
23
1.94
13896--14021
47
2.7
47
97
0
234
31
13
30
24
1.93
13898--14064
47
3.7
42
82
12
165
32
13
29
24
1.93
13892--14063
94
1.9
90
84
8
222
32
12
29
25
1.93
14267--14337
37
1.9
37
94
0
124
23
19
30
25
1.98
15601--15872
40
6.8
40
91
0
391
25
22
27
25
2.00
16048--16099
25
2.1
25
85
7
70
28
7
32
30
1.85
20126--20204
25
3.3
25
62
22
60
31
10
29
29
1.90
20101--20225
47
2.7
47
92
0
205
33
12
28
25
1.92
20148--20329
48
3.8
48
87
6
228
32
8
29
29
1.87
20476--20584
37
2.9
37
93
0
182
22
18
31
27
1.97
24331--24426
43
2.2
43
87
3
131
33
28
18
19
1.96
25076--25104
14
2.0
15
93
6
51
51
20
0
27
1.47
28933--29039
53
2.0
53
90
0
169
44
26
8
20
1.79
37448--37500
21
2.5
21
81
9
63
41
0
9
49
1.35
40188--40244
20
2.8
20
78
0
60
35
17
8
38
1.81
40220--40328
20
5.5
19
75
6
74
38
11
7
42
1.70
40209--40323
59
1.9
60
82
8
146
40
13
6
39
1.72
42939--43070
70
1.9
68
85
3
183
21
7
23
46
1.77
53465--53744
41
6.8
41
91
5
390
27
19
24
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61125--61403
41
6.8
41
90
6
381
27
19
24
28
1.99
61125--61404
122
2.3
123
86
7
383
27
19
24
28
1.99
68977--69210
43
5.5
41
80
14
226
27
20
23
29
1.98
73414--73447
3
11.0
3
87
6
50
35
2
0
61
1.11
73825--73854
15
1.9
16
93
6
53
33
6
3
56
1.42
74765--74811
14
3.3
15
79
11
62
53
0
0
46
1.00

Tables:   1

The End!