Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3115
Parameters: 2 7 7 80 10 50 1000
Length:  30970

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3966--4016
26
2.0
26
96
0
93
29
35
23
11
1.90
3829--4093
103
2.6
104
90
3
428
30
30
19
18
1.96
4422--4485
30
2.2
29
81
10
76
29
28
6
35
1.82
4429--4485
30
1.9
30
85
3
80
29
24
7
38
1.82
11424--11647
104
2.2
104
93
1
378
31
31
19
17
1.95
11976--12039
30
2.2
29
81
10
76
29
28
6
35
1.82
11983--12039
30
1.9
30
85
3
80
29
24
7
38
1.82
20061--20104
14
3.0
15
75
18
56
54
0
6
38
1.27
20972--21059
23
3.9
23
78
14
103
36
0
5
57
1.22
20979--21069
44
2.1
44
91
4
148
37
0
5
57
1.22
20972--21071
23
4.4
22
76
18
82
38
0
6
56
1.24
22191--22228
17
2.2
18
90
4
60
63
0
2
34
1.09
22471--22527
28
2.0
29
86
3
80
35
5
1
57
1.31
22520--22578
29
2.0
29
86
6
82
45
5
3
45
1.42
23811--23845
18
1.9
19
88
11
56
11
8
8
71
1.31

Tables:   1

The End!