Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2528
Parameters: 2 7 7 80 10 50 1000
Length:  23253

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77--134
28
2.1
28
96
0
107
44
1
6
46
1.40
451--502
23
2.3
23
83
3
61
36
15
3
44
1.65
462--513
23
2.3
23
100
0
104
25
11
3
59
1.49
2303--2544
50
4.7
50
84
5
279
21
29
24
25
1.99
2302--2550
100
2.4
104
85
6
319
21
29
23
25
1.99
2645--2676
13
2.5
13
94
0
55
56
12
0
31
1.37
7628--7687
21
2.8
22
70
7
52
38
26
18
16
1.92
11944--11974
12
2.6
12
100
0
62
51
6
0
41
1.27
13563--13682
40
2.8
44
81
12
160
21
20
24
34
1.97
13787--13980
46
4.3
46
65
10
121
31
24
18
25
1.98
13683--15027
134
10.1
134
95
0
2399
29
23
20
26
1.99
14975--15324
86
4.1
86
93
0
556
26
24
22
26
2.00
15050--15270
42
5.2
42
61
20
107
24
23
24
26
2.00
19454--19497
19
2.3
20
84
7
56
40
11
20
27
1.86
21828--21856
10
2.9
10
100
0
58
51
6
0
41
1.28

Tables:   1

The End!