Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3178
Parameters: 2 7 7 80 10 50 1000
Length:  24515

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1269--1444
40
4.4
40
83
6
225
26
27
22
23
1.99
4774--4951
40
4.5
40
89
3
236
22
24
29
24
1.99
12546--12708
40
4.1
40
84
3
213
27
28
20
22
1.99
15979--16099
47
2.6
45
80
6
136
31
10
30
27
1.90
16173--16257
40
2.2
40
84
2
109
17
20
31
30
1.95
17555--17728
45
3.8
45
80
6
208
21
21
28
28
1.99
17551--17720
92
1.8
92
93
2
297
21
21
29
27
1.99
20651--20711
28
2.2
28
87
0
86
9
16
16
57
1.64
23076--23251
46
3.8
45
81
10
212
21
21
29
28
1.98
23072--23243
93
1.8
93
94
0
308
20
21
30
27
1.98

Tables:   1

The End!