Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3190
Parameters: 2 7 7 80 10 50 1000
Length:  45598

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5365--5542
27
6.6
27
82
3
115
29
28
15
26
1.96
5386--5541
82
1.9
81
88
3
233
29
28
15
26
1.96
5365--5541
54
3.3
54
81
6
205
29
28
15
26
1.96
8822--9307
246
2.0
247
92
0
812
30
10
29
30
1.90
12715--12845
47
2.8
46
82
13
160
26
19
29
24
1.98
12717--12942
50
4.8
46
74
9
163
25
19
29
25
1.99
12717--12905
47
4.2
42
72
12
117
26
19
29
25
1.98
12717--12940
94
2.4
93
81
7
238
25
19
29
25
1.99
19008--19068
3
20.3
3
96
0
113
0
36
0
63
0.94
23593--23774
40
4.6
40
86
0
231
25
26
21
25
2.00
31846--32027
40
4.6
40
86
0
249
25
28
21
24
1.99
45155--45227
27
2.7
27
85
6
94
28
26
15
30
1.96

Tables:   1

The End!