Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1406
Parameters: 2 7 7 80 10 50 1000
Length:  28119

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
294--468
46
3.8
46
77
15
191
29
28
21
21
1.98
302--471
92
1.8
91
91
5
279
28
28
21
21
1.99
5765--5936
93
1.8
93
92
0
290
28
28
20
22
1.99
5758--5936
46
3.8
49
80
13
207
29
28
20
21
1.98
8968--9142
46
3.8
45
78
11
176
29
28
20
21
1.98
8975--9146
93
1.8
93
91
0
281
29
28
20
22
1.98
12544--12809
27
10.0
27
72
8
170
32
12
23
32
1.91
12544--12764
53
4.2
53
78
5
205
33
12
23
30
1.92
12544--12809
80
3.3
79
80
4
230
32
12
23
32
1.91
12563--12800
53
4.5
53
76
9
180
32
12
23
31
1.91
12563--12800
106
2.2
106
81
9
288
32
12
23
31
1.91
20030--20098
27
2.6
27
90
0
102
26
14
28
30
1.95

Tables:   1

The End!