Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2536
Parameters: 2 7 7 80 10 50 1000
Length:  75259

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15422--15644
40
5.6
39
83
5
232
24
20
28
26
1.99
15497--15679
79
2.3
80
81
1
217
25
20
28
25
1.99
19384--19428
23
1.9
24
81
4
56
44
8
8
37
1.67
25071--25198
37
3.5
37
93
0
220
25
32
19
23
1.98
25405--25936
47
11.1
47
88
4
758
26
30
12
30
1.92
25405--25936
145
3.7
143
92
3
777
26
30
12
30
1.92
25405--25936
98
5.5
94
89
4
758
26
30
12
30
1.92
29841--30216
40
9.4
40
92
0
585
26
27
21
24
1.99
33428--33565
48
3.0
47
81
17
155
26
29
12
31
1.93
38526--38908
39
9.9
39
73
19
263
26
27
21
24
1.99
38556--38908
75
4.6
75
72
18
239
26
27
21
24
1.99
49823--49896
29
2.6
29
86
4
96
25
31
16
27
1.96
54101--54268
40
4.2
40
83
4
106
25
27
23
23
2.00
54124--54268
40
3.6
40
85
4
193
23
26
24
25
2.00
62084--62250
40
4.2
40
81
6
97
25
26
23
23
2.00
62107--62250
40
3.6
40
84
6
184
23
25
25
25
2.00
64693--64844
27
5.6
27
92
3
232
26
13
28
30
1.94
64693--64844
55
2.8
55
91
2
243
26
13
28
30
1.94
68594--68775
37
4.9
37
95
1
321
26
31
19
22
1.98
68590--68771
73
2.5
73
93
4
321
26
31
19
22
1.98
68922--69056
48
2.8
48
91
0
216
29
28
8
33
1.86
69026--69219
47
4.1
47
94
0
325
26
28
11
32
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69094--69171
23
3.2
25
64
29
69
29
32
10
28
1.90
69119--69194
22
3.3
22
65
28
59
25
31
13
30
1.93

Tables:   1

The End!