Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2684
Parameters: 2 7 7 80 10 50 1000
Length:  37636

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4422--4538
44
2.6
45
85
8
166
29
19
15
35
1.93
4613--4652
21
1.9
21
89
0
62
35
20
17
27
1.95
8118--8180
29
2.2
29
81
16
78
33
1
0
65
1.03
8114--8182
28
2.5
27
80
15
79
37
1
0
60
1.06
11118--11220
41
2.5
41
93
0
170
49
5
22
22
1.71
11187--11258
24
3.0
24
91
2
108
52
6
23
16
1.68
15862--16028
55
3.0
55
85
0
235
29
26
22
22
1.99
17537--17698
46
3.6
46
92
2
258
33
14
23
28
1.94
19439--19681
48
5.1
48
88
0
315
34
17
20
27
1.95
19439--19681
96
2.5
96
89
0
360
34
17
20
27
1.95
23802--23827
3
8.7
3
100
0
52
0
34
30
34
1.58
25522--25555
17
2.1
17
94
5
61
38
0
0
61
0.96
26448--26495
22
2.2
22
84
0
60
72
4
0
22
1.01

Tables:   1

The End!