Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3270
Parameters: 2 7 7 80 10 50 1000
Length:  24349

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5378--5562
40
4.6
39
86
7
223
26
27
22
24
2.00
5378--5561
79
2.3
81
84
7
234
26
27
22
24
2.00
5345--5562
119
1.8
119
82
5
280
26
26
21
25
2.00
13600--13663
31
2.1
31
90
0
101
25
23
15
35
1.94
13868--13961
23
4.0
24
90
6
147
27
21
22
28
1.99
13946--13976
15
2.1
15
100
0
62
25
12
32
29
1.93
13925--14000
39
1.9
39
100
0
152
26
18
27
27
1.98
13961--14011
24
2.1
24
100
0
102
23
19
25
31
1.98
14063--14125
20
3.2
20
95
0
117
31
19
12
36
1.89
14067--14123
9
5.9
9
73
15
51
35
21
8
35
1.84
14162--14209
25
1.9
25
86
0
69
25
14
27
33
1.94
16645--16722
29
2.7
28
84
11
104
25
15
30
28
1.96
16675--17001
173
1.9
174
93
0
566
29
14
24
31
1.94

Tables:   1

The End!