Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2538
Parameters: 2 7 7 80 10 50 1000
Length:  30556

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1611--1640
15
2.0
15
100
0
60
13
6
6
73
1.24
1617--1669
13
3.7
14
83
11
56
15
7
1
75
1.11
6865--6921
28
2.0
29
83
10
73
61
1
24
12
1.40
6894--6945
22
2.4
22
75
18
54
63
1
25
9
1.35
9636--9698
33
1.9
33
84
12
85
12
26
6
53
1.62
9696--9751
21
2.7
21
72
5
51
8
17
1
71
1.21
9695--9751
14
4.2
13
75
16
53
8
17
1
71
1.19
9758--9833
18
4.1
18
73
11
64
6
15
3
73
1.19
9713--9820
6
17.7
6
71
9
76
6
17
2
73
1.17
10884--10924
12
3.5
12
90
3
57
9
4
2
82
0.89
11009--11039
12
2.6
12
94
0
53
6
3
6
83
0.88
11568--11614
20
2.3
20
81
0
58
29
34
12
23
1.92
15734--15780
20
2.3
20
81
0
58
29
34
12
23
1.92
22190--22232
12
3.6
12
96
0
77
79
2
6
11
1.02

Tables:   1

The End!