Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3629
Parameters: 2 7 7 80 10 50 1000
Length:  43019

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8041--8882
44
19.8
42
71
12
330
30
20
22
27
1.98
8037--8922
210
4.2
213
93
3
1432
30
20
22
26
1.98
10561--10609
3
16.7
3
93
4
64
34
6
0
59
1.22
11047--11100
22
2.4
23
75
3
56
31
9
7
51
1.61
19114--19148
18
1.9
18
88
11
54
60
0
11
28
1.32
20637--20676
20
2.0
21
85
14
57
7
5
20
67
1.34
21114--21226
45
2.5
44
84
7
138
30
24
21
23
1.98
21307--21847
88
6.2
88
85
1
685
29
19
23
27
1.98
21410--21811
44
9.2
42
64
17
149
27
21
24
26
1.99
28517--28591
18
4.2
17
77
13
71
17
5
0
77
0.95
28517--28577
23
2.7
21
78
16
59
16
3
0
80
0.84
28517--28584
6
11.5
6
75
9
59
16
4
0
79
0.89
28518--28594
35
2.2
35
81
4
84
18
5
0
76
0.96
31867--32271
44
9.2
44
65
15
210
21
22
22
34
1.97
31846--32343
88
5.7
88
90
0
746
20
22
21
34
1.97
32083--32313
44
5.2
44
65
12
132
19
24
23
33
1.97
33464--33490
11
2.5
11
100
0
54
55
7
7
29
1.55
34359--34399
16
2.7
14
82
17
55
14
2
2
80
0.92
34359--34399
7
5.4
7
86
13
55
14
2
2
80
0.92
35557--35809
73
3.5
72
91
3
391
31
18
17
31
1.95
35742--35986
88
2.8
87
85
4
296
34
20
17
27
1.95
36084--36258
72
2.4
73
81
5
212
33
26
14
25
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35950--36385
199
2.2
198
97
0
818
34
23
15
25
1.95
36406--36741
72
4.5
74
87
4
446
33
20
15
30
1.94
36406--36759
147
2.4
147
84
5
475
35
20
14
29
1.92

Tables:   1

The End!