Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1238
Parameters: 2 7 7 80 10 50 1000
Length:  67949

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49--209
40
4.0
40
84
5
191
26
27
21
24
1.99
7217--7389
40
4.3
40
86
5
217
26
26
24
23
2.00
18232--18288
29
2.0
29
92
0
96
28
10
22
38
1.87
18268--18378
43
2.6
43
77
5
116
27
17
23
31
1.97
31153--31220
24
2.8
24
88
0
109
51
16
26
5
1.67
31160--31214
8
6.9
8
76
0
56
49
18
29
3
1.64
36984--37261
154
1.8
154
81
1
351
26
24
17
30
1.97
52041--52212
43
4.0
43
73
12
138
31
25
15
27
1.95
59250--59360
55
2.0
55
84
3
143
18
27
26
28
1.98
63058--63087
14
2.2
13
94
5
51
60
13
6
20
1.55

Tables:   1

The End!