Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold947
Parameters: 2 7 7 80 10 50 1000
Length:  66101

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4600--4784
79
2.3
81
84
7
236
24
22
27
25
2.00
4601--4784
40
4.6
40
83
9
216
24
22
27
25
2.00
4653--4817
79
2.1
79
84
6
210
26
21
27
25
1.99
20557--20595
18
2.3
17
83
12
53
17
7
5
69
1.32
23303--23481
85
2.1
85
98
0
349
38
8
26
26
1.85
24647--24831
40
4.6
39
82
5
194
24
21
28
25
1.99
24647--24829
79
2.3
81
83
7
223
24
21
27
25
1.99
24700--24864
79
2.1
79
83
6
201
26
19
27
26
1.99
30362--30626
40
6.7
40
87
4
340
26
27
21
24
1.99
30362--30626
119
2.2
121
85
4
360
26
27
21
24
1.99
31754--31873
56
2.1
56
96
3
224
23
23
9
44
1.82
34478--34656
85
2.1
85
100
0
358
37
8
27
26
1.85
35823--36005
79
2.3
81
83
7
223
24
22
27
25
2.00
35824--36007
40
4.6
39
81
9
194
24
22
27
25
2.00
35876--36040
79
2.1
79
82
6
192
26
20
27
26
1.99
42615--42664
20
2.3
23
83
16
63
66
4
8
22
1.35
43637--43666
12
2.5
12
94
0
51
26
46
13
13
1.80
48160--48250
45
2.0
45
97
0
173
31
24
7
36
1.84
49671--49840
26
6.4
26
73
17
127
29
27
14
28
1.95
49773--49839
24
2.7
24
82
15
75
28
25
13
32
1.93
57796--57889
29
3.4
28
88
2
127
30
27
15
25
1.96
57796--57969
27
6.4
28
79
8
155
29
27
16
27
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57813--57968
26
5.7
27
81
5
145
28
27
16
26
1.97

Tables:   1

The End!