Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3565
Parameters: 2 7 7 80 10 50 1000
Length:  40364

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7087--7138
26
2.0
26
96
0
95
28
34
23
13
1.92
6953--7319
103
3.6
102
93
2
594
30
29
20
19
1.97
7190--7241
26
2.0
26
96
0
95
28
34
23
13
1.92
7655--7711
30
1.9
30
82
3
71
28
24
7
40
1.81
9522--9611
32
2.8
32
75
6
83
24
21
20
34
1.96
11508--11540
16
2.1
16
94
0
57
42
24
24
9
1.83
11755--11879
29
4.3
29
87
1
180
26
13
31
28
1.94
14101--14189
27
3.3
26
81
10
99
20
23
20
35
1.95
16416--16532
57
2.1
57
91
0
189
16
18
32
32
1.93
22682--22743
26
2.3
27
81
10
74
35
27
11
25
1.90
22862--22934
27
2.7
26
81
8
74
21
26
16
35
1.94
25724--25775
27
2.0
26
84
3
68
17
26
21
34
1.95
27849--27882
18
1.9
18
88
5
52
44
11
29
14
1.81
32222--32255
2
17.0
2
93
0
59
50
0
2
47
1.16
34927--35076
67
2.2
67
81
8
171
32
17
28
21
1.96
34951--35134
67
2.8
64
76
8
185
29
16
29
23
1.96
36924--37051
29
4.5
28
88
2
175
32
25
12
28
1.92
36923--37051
57
2.3
57
87
2
188
32
26
12
28
1.92

Tables:   1

The End!