Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2979
Parameters: 2 7 7 80 10 50 1000
Length:  38926

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3581--3743
43
3.8
43
82
11
201
28
19
29
22
1.98
9611--9703
9
10.0
9
80
6
96
34
1
16
48
1.53
9615--9707
48
1.9
49
86
2
134
34
1
15
49
1.51
9620--9734
48
2.5
48
78
9
116
35
1
13
48
1.53
9808--9863
15
3.8
15
76
21
64
51
0
1
46
1.11
10068--11362
290
4.5
290
98
0
2533
37
12
13
36
1.82
13306--13486
61
3.0
61
97
0
344
55
18
7
18
1.64
15835--15884
25
2.0
25
84
11
66
40
26
4
30
1.74
15902--15941
14
2.9
14
88
0
53
47
22
0
30
1.52
16098--16481
41
9.4
41
88
1
565
18
19
27
35
1.95
16098--16481
163
2.3
165
90
1
594
18
19
27
35
1.95
22012--22096
21
4.3
20
70
17
70
32
5
1
60
1.29
22013--22131
58
2.1
58
100
0
238
32
5
1
60
1.28
26900--26942
3
14.7
3
95
4
79
69
0
0
30
0.88
28210--28250
19
2.2
19
86
4
57
56
4
7
31
1.48
32791--32826
18
2.1
18
89
5
56
61
0
0
38
0.96
37759--38162
41
10.0
41
86
3
541
34
26
20
18
1.95
37759--38162
202
2.0
203
88
3
600
34
26
20
18
1.95
38317--38356
14
2.9
14
88
0
53
30
0
22
47
1.52
38774--38805
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!