Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1819
Parameters: 2 7 7 80 10 50 1000
Length:  30309

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1278--1452
46
3.8
46
78
6
201
21
21
29
28
1.98
1275--1445
92
1.8
93
93
1
299
21
21
29
27
1.99
4361--4397
15
2.5
15
90
0
56
13
18
10
56
1.66
4359--4436
14
5.4
15
80
7
90
10
16
14
58
1.62
6793--6963
92
1.8
92
93
1
297
22
21
29
26
1.99
9028--9052
9
2.8
9
100
0
50
20
0
0
80
0.72
11606--11639
14
2.4
14
86
13
52
41
2
0
55
1.15
11605--11642
15
2.5
15
83
8
51
39
2
0
57
1.12
15329--15577
50
4.8
50
85
4
284
20
29
24
26
1.99
15328--15577
100
2.4
104
88
6
357
20
29
24
26
1.99
15672--15703
13
2.5
13
94
0
55
56
12
0
31
1.37
15915--15972
30
1.9
30
89
0
89
31
24
3
41
1.71

Tables:   1

The End!