Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2021
Parameters: 2 7 7 80 10 50 1000
Length:  23035

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
472--634
39
4.3
39
85
9
196
25
28
21
24
1.99
3780--3920
17
7.9
17
83
12
96
39
11
12
36
1.80
3788--3913
35
3.5
36
93
3
200
39
11
12
36
1.79
3788--3913
19
6.9
19
84
10
174
39
11
12
36
1.79
3788--3919
54
2.4
54
85
12
198
40
10
12
36
1.78
12093--12314
39
5.7
40
83
7
260
26
27
21
25
2.00
12093--12259
77
2.1
79
85
7
234
26
27
20
25
1.99
12074--12314
40
6.1
40
81
8
255
25
26
21
25
2.00
15445--15580
18
7.6
18
89
4
195
38
11
12
37
1.79
15436--15587
72
2.1
73
84
11
224
39
9
13
36
1.78
15437--15580
54
2.6
54
92
4
227
38
10
13
37
1.79
15463--15616
18
8.1
20
82
7
87
36
8
14
40
1.77
22391--22570
44
4.1
44
78
8
204
30
16
25
27
1.96
22562--22911
114
3.0
118
95
4
622
32
17
19
30
1.95

Tables:   1

The End!