Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2228
Parameters: 2 7 7 80 10 50 1000
Length:  42708

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1520--1742
40
5.7
40
82
7
233
25
21
27
25
1.99
1520--1740
79
2.8
78
82
6
241
25
21
27
25
1.99
1599--1775
79
2.2
80
82
4
200
25
21
28
24
1.99
9437--9658
40
5.6
40
82
6
202
25
21
27
25
1.99
9517--9693
78
2.2
80
81
4
191
25
22
28
24
1.99
13631--13760
64
2.0
64
92
0
215
40
25
8
25
1.83
23068--23220
46
3.3
45
75
13
143
25
32
18
23
1.97
25265--25298
16
2.0
18
88
11
54
58
20
5
14
1.57
35037--35068
16
2.0
16
93
0
55
12
12
40
34
1.81
35053--35140
40
2.2
40
89
4
133
22
20
29
27
1.99

Tables:   1

The End!