Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1139
Parameters: 2 7 7 80 10 50 1000
Length:  39329

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1472--1497
13
2.0
13
100
0
52
76
0
7
15
0.99
10738--10776
11
3.6
11
89
3
62
79
2
5
12
1.00
17515--17565
26
2.0
26
96
0
93
29
35
23
11
1.90
17380--17643
103
2.6
102
91
1
411
29
30
20
19
1.97
17971--18034
30
2.2
29
81
10
76
29
28
6
35
1.82
17978--18034
30
1.9
30
85
3
80
29
24
7
38
1.82
20381--20428
15
3.3
15
73
5
53
31
0
25
43
1.55
21951--21997
15
3.3
15
71
17
55
40
19
4
36
1.71
22877--23041
45
3.7
45
87
3
201
24
23
27
25
2.00
31519--31565
20
2.3
20
81
0
58
23
12
34
29
1.92
37810--37856
17
2.8
17
75
15
53
10
29
0
59
1.31
37827--37883
27
2.1
27
83
0
69
7
28
0
64
1.19
37849--37891
19
2.3
18
84
8
50
4
25
0
69
1.07

Tables:   1

The End!