Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3789
Parameters: 2 7 7 80 10 50 1000
Length:  37107

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
764--884
56
2.1
57
96
1
226
23
23
9
44
1.81
12463--12608
44
3.4
43
80
2
168
31
23
15
28
1.96
12451--12611
86
1.9
84
83
2
205
32
24
14
27
1.95
14914--14994
24
3.3
23
73
19
67
71
0
22
6
1.08
14922--15000
17
4.6
16
71
17
52
72
0
21
6
1.07
14923--15005
34
2.4
36
78
13
93
72
0
21
6
1.06
20855--20899
21
2.1
21
84
8
56
11
33
26
28
1.91
24691--24757
20
3.3
20
89
0
107
32
13
20
32
1.92
24806--24951
25
6.0
24
88
5
197
29
19
22
28
1.98
25145--25207
31
2.0
31
87
6
92
38
15
20
25
1.92
32775--32839
20
3.3
20
85
4
89
33
13
20
32
1.91
32883--32964
25
3.4
25
94
3
141
29
18
24
28
1.98
32883--33008
49
2.6
49
80
14
129
30
18
23
27
1.97
33192--33251
29
2.0
30
93
3
104
33
16
25
25
1.96

Tables:   1

The End!