Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2018
Parameters: 2 7 7 80 10 50 1000
Length:  21300

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5427--5546
56
2.1
56
98
0
231
22
23
9
45
1.81
7995--8035
21
2.0
21
85
0
55
36
2
9
51
1.48
8511--8541
15
2.1
15
93
0
53
35
22
0
41
1.54
9465--9500
15
2.2
17
90
9
58
58
5
8
27
1.50
12390--12679
47
6.2
47
95
2
489
32
11
30
26
1.91
12331--12679
141
2.5
139
86
5
496
32
10
30
27
1.90
12625--12736
55
2.0
55
86
3
154
31
11
31
25
1.91
15147--15221
38
2.0
38
86
5
107
30
18
26
24
1.98
15275--15594
40
8.1
40
90
2
484
24
22
28
25
1.99
15275--15594
79
4.0
80
90
2
484
24
22
28
25
1.99
18967--19152
48
3.9
47
90
8
286
31
10
32
25
1.90
18967--19152
95
1.9
97
89
8
292
31
10
32
25
1.90
18967--19215
47
5.1
47
80
14
176
33
10
30
25
1.89

Tables:   1

The End!