Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold978
Parameters: 2 7 7 80 10 50 1000
Length:  28469

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
699--821
36
3.5
36
69
8
108
22
20
26
30
1.98
5286--5338
18
2.9
18
86
5
72
43
13
20
22
1.86
9774--9825
24
2.2
24
85
0
68
23
46
0
30
1.53
9782--9821
12
3.3
12
85
0
53
30
37
0
32
1.58
13934--13967
13
2.6
13
95
0
59
35
29
17
17
1.93
16518--16654
46
3.0
46
85
0
184
26
30
8
34
1.87
16628--16848
47
4.7
47
94
0
370
25
31
12
30
1.93
16744--16818
23
3.2
23
62
23
57
28
32
10
29
1.90
20381--20602
40
5.6
39
86
7
256
25
21
27
25
1.99
20381--20602
78
2.8
79
82
10
276
25
21
27
25
1.99
26434--26643
39
5.4
38
81
7
169
24
26
21
27
1.99
26472--26645
78
2.2
78
79
12
189
24
25
21
27
1.99

Tables:   1

The End!