Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3126
Parameters: 2 7 7 80 10 50 1000
Length:  35246

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3448--3481
6
5.7
6
96
0
50
44
23
0
32
1.54
3489--3533
20
2.2
20
84
4
54
8
26
0
64
1.23
4520--4566
14
3.5
13
91
8
76
12
2
6
78
1.02
4520--4566
15
3.3
15
91
5
71
12
2
6
78
1.02
4520--4554
13
2.8
12
91
4
52
11
0
5
82
0.82
6925--6977
23
2.4
22
76
20
56
69
1
18
9
1.25
12211--12245
10
3.5
10
88
0
52
37
22
25
14
1.92
26575--26611
4
9.0
4
88
5
56
78
0
0
21
0.75
26555--26613
21
2.8
22
79
7
68
71
3
1
23
1.11
29576--29611
14
2.7
13
91
4
54
80
0
0
19
0.71
30566--30613
18
2.7
18
74
6
53
66
2
2
29
1.14
34630--34685
23
2.5
22
85
8
85
46
21
10
21
1.81
34915--34949
13
2.7
13
90
0
52
42
11
0
45
1.40
35018--35073
20
2.9
19
83
2
76
32
14
28
25
1.94

Tables:   1

The End!