Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2619
Parameters: 2 7 7 80 10 50 1000
Length:  28939

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3042--3084
21
2.0
21
82
8
52
23
20
4
51
1.66
4127--4219
39
2.5
37
80
7
98
27
29
22
20
1.98
4363--4431
27
2.7
26
82
10
72
31
26
0
42
1.56
4574--4618
3
15.0
3
80
0
54
57
6
0
35
1.25
4574--4620
18
2.6
18
93
0
76
55
8
0
36
1.31
4578--4618
12
3.4
12
93
0
64
56
7
0
36
1.27
5324--5357
16
2.1
16
88
0
50
2
14
8
73
1.19
5360--5423
31
2.2
29
80
8
76
48
1
1
48
1.20
12908--13072
82
2.0
82
100
0
330
37
19
9
33
1.84
14336--14365
11
2.7
11
100
0
60
63
6
0
30
1.20
15034--15161
64
2.0
64
98
0
247
42
10
28
17
1.83
25680--25707
6
4.7
6
100
0
56
67
0
0
32
0.91

Tables:   1

The End!