Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1807
Parameters: 2 7 7 80 10 50 1000
Length:  12184

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--67
17
2.7
19
78
15
59
32
2
0
65
1.04
297--345
23
2.1
24
88
3
73
73
2
0
24
0.94
304--346
19
2.3
19
84
4
61
76
2
0
20
0.89
380--433
10
5.6
10
73
22
53
62
3
0
33
1.12
336--433
20
5.3
17
68
19
54
65
3
0
31
1.08
598--882
7
41.6
7
80
12
154
85
0
1
12
0.70
603--801
10
20.0
10
88
8
207
91
0
0
8
0.42
607--756
1
150.0
1
95
0
273
98
0
0
2
0.14
600--901
9
34.6
9
78
15
81
84
0
1
13
0.74
817--882
20
3.2
19
80
16
69
77
1
3
18
0.98
600--898
12
22.5
14
79
13
177
84
0
1
13
0.73
1021--1143
1
123.0
1
77
0
57
82
1
0
15
0.74
1028--1142
18
5.8
21
69
15
75
81
1
0
16
0.77
1011--1130
29
4.1
28
77
11
118
80
1
0
17
0.85
1021--1143
62
2.1
59
80
10
135
82
1
0
15
0.74
1021--1143
20
5.8
20
71
16
86
82
1
0
15
0.74
1020--1143
30
4.2
29
72
10
99
82
1
0
16
0.75
1179--1212
14
2.5
14
90
4
52
91
0
2
5
0.51
1115--1268
64
2.4
65
81
10
176
74
1
1
22
1.02
1377--1440
17
3.2
20
85
10
80
85
0
0
14
0.59
1378--1440
22
3.1
22
76
15
64
85
0
0
14
0.59
1377--1408
1
32.0
1
100
0
64
100
0
0
0
0.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1402--1528
48
2.6
48
77
12
120
69
1
0
29
0.98
1548--1606
13
4.4
14
81
16
70
83
3
0
13
0.78
1560--1606
14
3.3
14
88
5
67
87
2
0
10
0.63
1574--1607
11
3.0
11
86
4
50
85
2
0
11
0.71
1814--1863
1
50.0
1
95
0
91
2
0
0
98
0.14
1864--1892
1
29.0
1
100
0
58
100
0
0
0
0.00
2042--2072
15
2.1
15
93
0
53
67
0
0
32
0.91
2440--11218
1
8779.0
1
99
0
17477
99
0
0
0
0.01
11815--11891
1
77.0
1
100
0
154
0
0
0
100
0.00

Tables:   1

The End!