Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1893
Parameters: 2 7 7 80 10 50 1000
Length:  28092

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
439--532
28
3.3
30
86
10
144
26
51
5
17
1.66
974--1008
17
2.1
17
94
0
61
31
0
0
68
0.90
979--1187
25
8.6
25
70
15
91
33
6
4
56
1.44
1125--1190
22
2.9
23
82
6
80
30
6
6
57
1.47
1130--1191
24
2.7
23
85
5
81
30
4
6
58
1.44
1254--1309
25
2.3
24
79
14
62
37
16
3
42
1.65
11468--11841
73
5.1
73
92
2
601
28
17
21
32
1.96
11754--12076
89
3.6
89
91
1
488
27
14
17
40
1.89
11915--11948
16
2.1
16
88
0
50
17
5
2
73
1.16
12004--12037
17
2.0
17
94
0
59
20
8
0
70
1.13
12917--12971
18
3.4
18
65
27
50
25
49
5
20
1.70
12907--13006
30
3.3
30
90
2
164
27
50
5
18
1.67
12947--13001
18
3.3
18
66
23
57
21
47
7
23
1.76
13551--13622
25
2.8
26
81
6
94
36
6
2
54
1.42
13580--13688
28
4.0
28
75
13
104
31
6
4
57
1.44
13639--13701
25
2.5
24
84
7
72
30
4
6
58
1.43
13762--13817
25
2.3
24
79
14
62
37
16
3
42
1.65
19121--19237
39
3.0
40
88
5
184
24
29
22
23
1.99
23338--23596
99
2.7
99
83
8
281
25
29
16
28
1.97
23338--23621
96
3.0
94
78
10
274
24
28
17
29
1.97
26652--26717
19
3.2
21
77
16
66
37
18
7
36
1.79
26655--26699
22
2.0
22
86
4
63
37
17
6
37
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26678--26751
19
3.9
19
92
3
132
36
17
10
35
1.85
26671--26751
37
2.2
38
89
8
132
35
18
9
35
1.84

Tables:   1

The End!