Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1331
Parameters: 2 7 7 80 10 50 1000
Length:  39252

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
332--456
28
4.4
28
85
5
162
33
25
11
29
1.91
5211--5264
24
2.2
24
84
12
67
29
37
16
16
1.91
14970--15780
403
2.0
404
89
2
1229
38
20
10
30
1.85
15891--15966
38
2.0
38
100
0
152
34
13
26
26
1.93
21982--22077
48
2.0
48
100
0
192
27
35
8
29
1.86
27689--27808
43
2.8
43
82
6
136
24
16
25
33
1.96
31033--31248
76
2.8
79
83
9
266
24
21
28
25
1.99
31033--31248
40
5.6
40
83
9
252
24
21
28
25
1.99
35941--35992
22
2.4
22
100
0
104
36
40
0
23
1.55
36565--36781
39
5.7
38
85
10
255
25
28
21
24
1.99
36542--36768
76
3.0
76
84
7
266
25
27
20
25
1.99

Tables:   1

The End!