Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3061
Parameters: 2 7 7 80 10 50 1000
Length:  45035

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6487--6709
40
5.7
40
85
5
269
24
21
28
26
1.99
6487--6709
78
2.8
78
80
9
238
24
21
28
26
1.99
6487--6742
118
2.2
118
79
6
261
25
20
28
25
1.99
10899--10950
23
2.3
23
82
0
59
26
21
19
32
1.97
11057--11117
24
2.5
25
78
7
72
18
8
37
36
1.80
11075--11124
24
2.1
24
92
0
82
24
6
36
34
1.80
13234--13281
20
2.4
20
92
0
78
35
10
2
52
1.48
14022--14091
24
2.9
24
93
0
113
27
15
31
25
1.96
14080--14138
23
2.5
23
80
2
64
20
10
32
37
1.86
15187--15220
17
2.0
17
88
0
50
32
14
8
44
1.76
15312--15376
31
2.1
31
83
11
80
35
10
0
53
1.36
16895--16948
25
2.1
26
83
10
67
38
5
1
53
1.35
23615--23643
14
2.0
15
93
6
51
27
0
20
51
1.47
37506--37643
69
2.0
69
91
5
226
26
21
29
22
1.99

Tables:   1

The End!