Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1809
Parameters: 2 7 7 80 10 50 1000
Length:  27372

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5045--5150
53
2.0
53
98
0
203
37
17
16
27
1.92
6315--6408
46
2.0
46
93
4
163
35
22
18
24
1.96
7029--7075
23
2.1
23
84
7
62
51
12
4
31
1.59
14516--14562
23
2.1
23
84
7
62
51
12
4
31
1.59
19899--19935
16
2.3
16
100
0
74
16
10
5
67
1.38
19976--20022
12
3.9
12
89
10
78
19
0
8
72
1.10
19974--20022
24
2.1
23
96
3
89
22
0
8
69
1.14
20151--20197
20
2.3
20
85
0
67
29
36
12
21
1.91
22803--22908
48
2.2
47
85
9
135
59
1
24
14
1.45
24574--24620
20
2.3
20
85
0
67
29
36
12
21
1.91
26891--26937
23
2.1
23
84
7
62
51
12
4
31
1.59

Tables:   1

The End!