Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3078
Parameters: 2 7 7 80 10 50 1000
Length:  33155

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2923--2992
21
3.1
23
67
24
67
30
12
32
24
1.93
2850--3027
91
2.0
88
85
8
243
33
10
29
26
1.90
2850--2996
47
3.2
45
90
6
224
33
10
29
26
1.89
3004--3076
34
2.2
32
92
7
121
36
8
26
28
1.85
3276--3384
37
2.9
37
94
0
182
23
19
30
26
1.98
4640--4945
40
7.8
40
88
4
444
25
21
27
26
1.99
9275--9468
47
4.1
47
93
0
298
34
10
29
25
1.90
9670--9782
37
3.0
37
86
1
145
25
16
28
29
1.97
12811--12870
21
2.9
21
92
2
95
25
30
35
10
1.88
13902--14173
47
5.7
49
74
8
206
21
30
21
26
1.98
13902--14075
49
3.6
46
79
9
170
20
29
22
27
1.98
16902--17108
53
3.8
53
76
1
144
19
23
17
38
1.93
21452--21635
40
4.7
40
81
7
207
25
27
22
25
2.00
21452--21635
79
2.3
81
81
8
209
25
27
22
25
2.00
29379--29556
40
4.6
40
76
12
165
25
25
22
26
2.00
29405--29508
39
2.6
40
90
1
156
25
26
21
26
1.99
29405--29555
79
1.9
79
81
8
182
25
25
21
27
2.00

Tables:   1

The End!