Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2451
Parameters: 2 7 7 80 10 50 1000
Length:  39017

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4100--4283
79
2.3
81
83
5
232
24
21
27
26
1.99
4099--4283
40
4.7
40
82
6
216
24
21
27
26
1.99
4146--4316
79
2.2
79
83
6
204
26
18
26
27
1.98
5940--6041
42
2.4
42
81
0
114
17
24
18
39
1.92
17191--17225
18
1.9
18
88
0
52
25
28
0
45
1.54
18707--18747
21
1.9
22
85
5
57
46
14
2
36
1.58
20900--20949
24
2.1
24
88
0
73
52
6
4
38
1.45
21498--21560
31
2.0
31
96
0
117
28
14
28
28
1.95
28358--28475
40
3.0
39
82
5
121
27
26
20
26
1.99
28404--28544
40
3.6
38
80
10
142
27
27
21
23
1.99
36208--36354
40
3.7
40
83
5
120
25
27
21
25
2.00
36254--36434
80
2.3
80
83
9
219
27
27
20
23
1.99
36251--36434
40
4.6
40
81
7
196
28
27
20
23
1.99

Tables:   1

The End!