Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold608
Parameters: 2 7 7 80 10 50 1000
Length:  39870

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1300--1473
27
6.4
27
79
5
109
28
28
16
27
1.97
1300--1473
54
3.2
55
79
10
196
28
28
16
27
1.97
1317--1472
82
1.9
81
85
3
215
28
28
16
26
1.97
9170--9347
27
6.6
27
79
3
115
28
28
16
26
1.97
9170--9347
54
3.3
55
80
10
204
28
28
16
26
1.97
9191--9346
82
1.9
81
85
3
215
28
28
16
26
1.97
13252--13424
46
3.8
45
76
11
163
23
19
26
31
1.98
13249--13419
93
1.8
93
87
2
254
22
19
26
30
1.98
14743--14810
24
2.8
24
95
0
118
35
4
38
22
1.74
16147--16247
26
3.8
26
85
7
132
16
22
20
39
1.92
16147--16247
53
1.9
53
85
4
141
16
22
20
39
1.92
16182--16247
27
2.5
24
85
11
62
12
22
22
42
1.87
16521--16546
9
2.9
9
100
0
52
34
19
23
23
1.96
22419--22496
24
3.2
24
87
0
111
37
3
39
19
1.70
23908--24018
54
2.1
53
86
1
150
18
25
19
36
1.95
23908--24018
27
4.1
27
83
5
136
18
25
19
36
1.95
26851--27028
27
6.6
27
84
3
205
29
28
15
26
1.96
26872--27027
82
1.9
81
88
3
233
29
28
15
26
1.96
30724--30899
27
6.5
27
82
2
183
26
14
28
30
1.95
30724--30878
81
1.9
81
88
2
231
26
14
28
30
1.95
30720--30899
81
2.2
81
83
2
227
26
15
27
30
1.96
38808--38877
28
2.6
27
86
2
86
28
20
28
22
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38753--38904
55
2.8
53
81
4
178
28
16
27
26
1.97
38754--38909
27
5.7
27
78
6
145
28
16
28
27
1.97

Tables:   1

The End!