Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3214
Parameters: 2 7 7 80 10 50 1000
Length:  35238

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3348--3531
40
4.7
40
80
8
198
24
22
27
25
2.00
3404--3554
79
1.9
79
81
8
182
26
20
27
25
1.99
10035--10098
25
2.6
25
85
5
76
37
4
40
17
1.70
12225--12449
40
5.6
40
83
3
281
24
24
27
24
2.00
12227--12449
83
2.8
79
87
6
329
23
24
27
24
2.00
14416--14446
16
2.0
15
93
6
53
51
25
19
3
1.62
14863--14973
27
4.1
27
86
5
145
16
24
22
36
1.94
14863--14973
54
2.1
53
89
1
168
16
24
22
36
1.94
21262--21315
25
2.2
25
96
0
99
38
5
37
18
1.74
22721--22829
27
4.1
27
88
5
150
16
24
22
35
1.95
26893--27104
40
5.3
40
80
2
248
24
20
27
27
1.99
26897--27113
80
2.7
79
88
3
310
24
21
27
26
1.99
34953--35162
40
5.3
40
81
6
250
23
20
28
27
1.99
34957--35162
79
2.6
80
90
2
319
23
20
28
27
1.99

Tables:   1

The End!