Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3255
Parameters: 2 7 7 80 10 50 1000
Length:  36316

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3121--3284
23
7.2
23
76
6
147
16
2
36
44
1.61
3121--3284
45
3.6
45
77
8
170
16
2
36
44
1.61
6286--6564
27
10.4
27
86
2
346
43
18
19
17
1.88
6338--6564
107
2.1
108
86
4
307
44
19
19
17
1.88
6751--6846
25
3.8
25
86
6
122
12
18
25
43
1.85
7185--7234
21
2.4
21
93
0
82
42
12
4
42
1.60
7725--7970
121
2.0
124
97
2
471
37
12
21
28
1.90
9558--9600
22
2.0
22
86
9
61
60
4
2
32
1.30
16029--16387
43
8.3
43
84
1
441
29
30
17
22
1.96
20539--20569
14
2.1
15
94
5
55
35
45
0
19
1.51
21516--21709
40
4.8
40
82
2
217
31
28
16
22
1.96
21516--21709
81
2.4
81
85
6
268
31
28
16
22
1.96
21788--21871
40
2.1
40
86
0
114
23
15
20
40
1.90
24424--24448
9
2.8
9
100
0
50
56
0
0
44
0.99
26541--26580
19
2.1
19
100
0
80
37
5
15
42
1.68
33234--33277
21
2.1
21
84
12
56
22
0
18
59
1.38
35211--35337
32
4.0
32
84
7
159
37
18
22
22
1.94
35339--35404
26
2.5
26
90
0
105
40
22
19
16
1.91
35505--35639
24
5.6
24
80
0
117
45
21
6
26
1.76
35704--35799
26
3.6
27
87
4
142
29
23
15
31
1.96

Tables:   1

The End!