Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1311
Parameters: 2 7 7 80 10 50 1000
Length:  25851

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2058--2105
20
2.4
20
67
0
51
33
18
27
20
1.96
3804--3895
18
5.2
17
67
16
62
7
18
3
70
1.25
3802--3896
6
15.0
6
68
18
50
7
18
3
70
1.24
5183--5211
10
2.7
11
94
5
51
6
3
6
82
0.93
6601--6648
20
2.4
20
67
0
51
33
18
27
20
1.96
9244--9610
186
2.0
186
87
5
537
27
23
12
35
1.91
9677--9709
11
3.1
11
91
8
59
69
9
0
21
1.15
9681--9707
10
2.7
10
100
0
54
77
7
0
14
0.97
9745--9803
15
3.6
16
86
9
75
62
8
8
20
1.49
9766--9803
15
2.5
15
100
0
76
68
10
5
15
1.36
10741--10790
18
2.7
18
80
17
50
68
2
22
8
1.26
13589--13682
46
2.0
46
93
4
163
24
18
22
35
1.96
16745--16792
12
3.7
13
83
8
53
72
8
4
14
1.23
16756--16790
13
2.7
13
90
0
52
80
2
2
14
0.95
16828--16881
14
3.9
14
92
4
92
62
0
12
24
1.30
16828--16881
27
2.0
28
92
3
92
62
0
12
24
1.30
20229--20274
21
2.2
22
80
11
60
58
2
30
8
1.40

Tables:   1

The End!