Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2192
Parameters: 2 7 7 80 10 50 1000
Length:  35861

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5369--5446
36
2.1
36
85
2
102
25
32
17
24
1.97
5565--6092
47
11.1
47
92
4
846
29
29
9
31
1.88
5565--6092
96
5.5
95
93
3
836
29
29
9
31
1.88
9364--9545
40
4.6
40
86
2
251
24
29
21
24
1.99
9364--9545
79
2.3
80
86
2
251
24
29
21
24
1.99
9364--9582
79
2.8
79
81
5
221
23
29
21
25
1.99
9441--9663
40
5.6
40
77
10
133
25
26
21
26
2.00
9364--9663
119
2.5
118
79
9
283
25
28
21
25
1.99
9968--10046
29
2.7
29
86
5
106
27
32
15
24
1.95
10028--10173
43
3.4
43
98
0
283
26
35
15
22
1.94
12034--12112
37
2.1
37
90
0
122
25
31
18
24
1.98
12231--12663
47
9.1
47
92
3
672
29
30
8
32
1.87
12231--12663
192
2.3
190
91
4
703
29
30
8
32
1.87
19530--19577
25
1.9
25
91
0
78
35
25
14
25
1.94
19721--19933
23
9.1
23
87
3
300
29
21
21
27
1.99
19719--19933
47
4.6
47
86
4
292
29
21
21
27
1.98
19719--19954
70
3.3
70
91
2
357
29
21
22
27
1.99
20148--20211
31
2.1
30
85
2
83
39
15
20
25
1.92
27037--27088
26
2.0
26
92
0
86
30
34
21
13
1.92
27005--27271
105
2.6
103
90
3
428
30
30
20
18
1.96
34044--34094
26
2.0
26
88
3
77
27
35
23
13
1.93
34012--34276
103
2.6
104
88
6
405
29
30
20
18
1.97

Tables:   1

The End!