Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2439
Parameters: 2 7 7 80 10 50 1000
Length:  34248

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1609--1759
39
3.9
40
91
6
256
25
23
29
22
1.99
9602--9755
40
3.9
40
90
0
238
27
22
27
23
1.99
9602--9782
80
2.3
79
83
5
231
28
22
26
22
1.99
12445--12492
24
2.0
24
91
0
78
37
8
16
37
1.79
13032--13101
35
2.1
34
91
5
115
40
8
4
47
1.54
21512--21689
85
2.1
84
96
1
329
37
8
28
25
1.85
22947--23635
47
14.6
47
92
2
987
32
9
29
27
1.89
26195--26512
40
7.8
40
87
5
433
24
21
28
25
1.99
26195--26512
79
3.9
80
87
6
433
24
21
28
25
1.99
26196--26499
165
1.8
165
90
0
491
25
21
28
25
1.99
26675--26726
25
2.1
25
85
7
70
28
7
32
30
1.85
27763--27939
85
2.1
85
98
0
345
37
8
27
26
1.85
29195--29783
47
12.6
47
92
3
847
32
9
29
27
1.89

Tables:   1

The End!